phenoforge

Semantic value set assembly for clinical cohort definitions, over MCP.

This is the API reference, generated from the docstrings in src/phenoforge/. For setup, the CLI, the MCP tool surface, and what’s been measured and what hasn’t, see the README — this site documents the code, the README documents the project.

API Reference

• phenoforge.engine
  • phenoforge.engine.models
  • phenoforge.engine.db
  • phenoforge.engine.lookup
  • phenoforge.engine.retrieval
  • phenoforge.engine.dense
  • phenoforge.engine.hybrid
  • phenoforge.engine.expansion
  • phenoforge.engine.curated
  • phenoforge.engine.explain
• phenoforge.agent
  • phenoforge.agent.state
  • phenoforge.agent.nodes
  • phenoforge.agent.graph
• phenoforge.mcp
  • phenoforge.mcp.server
• phenoforge.eval
  • phenoforge.eval.models
  • phenoforge.eval.metrics
  • phenoforge.eval.harness
  • phenoforge.eval.decomposition